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“Nature versus nurture” and incompletely penetrant mutations
  1. DK Simon1,
  2. MT Lin2,
  3. A Pascual-Leone3
  1. 1Department of Neurology, Beth Israel Deaconess Medical Center, Boston, MA, USA
  2. 2Department of Neurology, Weill Medical College of Cornell University, New York, NY, USA
  3. 3Department of Neurology, Beth Israel Deaconess Medical Center, Boston, MA, USA
  1. Correspondence to:
 Dr M T Lin, Department of Neurology and Neuroscience, Weill Medical College of Cornell University, New York, NY 10021, USA;
 mtL2002{at}med.cornell.edu

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Lessons from twin studies of parkinson's disease

The debate over the relative roles of “nature versus nurture” remains unresolved in many fields of study, from childhood education to animal behaviour or neurodegenerative disorders. Points of view frequently are polarised, either nature or nurture, rather then exploring the ways in which both sides play critical and complementary roles. Proponents of “nature” argue that human attributes are uniquely and primarily conditioned by genetics, opposing the view of those who think that environmental influences and experience determine individual differences. Arguments similar to those brought to bear regarding acquisition of skills, language, or cognitive styles also apply to human pathology. Often, in the discussion of disease the terms used are “genetic” versus “environmental”, but the implication is the same as in the “nature” versus “nurture” debate. Disorders considered to be primarily genetic are ones in which the presence or absence of genetic mutations is the primary determinant of disease, independent of environmental circumstances. A disease considered to be primarily environmental is one in which people of virtually any genetic background can develop the disease provided that they are exposed to the necessary environmental factor or factors. However, for many disorders, the risk is strongly influenced by both genetic and environmental factors.1, 2 For example, a susceptibility gene may strongly influence the risk of developing a disease only in response to a specific environmental exposure. If the environmental exposure occurs infrequently, the gene will be of low penetrance, and it may seem that the environmental exposure is the primary determinant of the disease, even though the gene is required for developing the disease. Therefore, even when environmental agents are suspected to be a major cause of a particular disease, this does not exclude the possibility that genetic factors also play a major part, particularly genetic mutations with low penetrance. Similarly, a critical mix of nature and nurture is likely to determine personal characteristics. Genetic factors may be thought of as laying the foundation on which environmental agents exert their influence. If so, then although certain environmental factors alone (regardless of genetic factors) and certain genetic factors alone (regardless of environmental influences) may explain some behaviours and disease states, most of the time the interaction of both genetic and environment factors will be required.

Deafness due to aminoglycoside toxicity is a particularly clear illustration of this interdependence. Prolonged exposure to aminoglycosides is toxic to cochlear cells. However, a mutation at nucleotide position 1555 in the mitochondrial 12S ribosomal RNA gene is associated with an extremely high susceptibility to aminoglycoside induced deafness, even at exposure levels that would not be toxic to most people.3–5 In most cases, the mutation does not cause deafness without aminoglycoside exposure. The “penetrance” of this mutation is therefore dependent on the frequency with which people are exposed to an aminoglycoside antibiotic. If exposure to aminoglycoside antibiotics were rare, then the mutation would have low penetrance, and the critical role of this mutation in determining susceptibility to non-syndromic deafness might be difficult to recognise.

To illustrate these points further, in this discussion, we will focus primarily on the potential role of incompletely penetrant mutations in late onset Parkinson's disease (PD), although similar arguments apply to many late onset neurodegenerative diseases and normal cognitive abilities.

GENETIC AND ENVIRONMENTAL FACTORS IN PD

It is currently recognised that most late onset neurodegenerative disorders have both genetic and environmental influences. In the case of PD, the relative roles of genetic and environmental factors remain controversial. A recent epidemiological study of the Icelandic population suggested a significant genetic component to late onset PD.6 By contrast, another study comparing concordance rates in monozygotic (MZ) and dizygotic (DZ) twins failed to show evidence for a genetic component for late onset PD.7 For PD with onset after the age of 50, which accounts for most cases of PD, no significant differences were found in the concordance rates between 71 MZ and 90 DZ twin pairs in which at least one twin had PD, though there was a non-significant trend towards increased concordance rates in the MZ twins. This twin study has been interpreted by some as showing that there is no significant genetic component in late onset PD.8 The data from this important study does argue against a major role for high penetrant mutations such as α-synuclein9 or parkin10 in sporadic late onset PD. However, other potentially major genetic contributions are not excluded. The inability of this type of study to address the potential role of mitochondrial genetic factors has been addressed previously.11, 12 Additionally, we show below that even large twin studies such as this are insufficiently powered to detect many incompletely penetrant nuclear genetic mutations, even though such mutations could still greatly increase the risk for PD and play a major epidemiological part. Illustrative hypothetical examples are discussed in detail below.

PREDICTIONS BASED ON A PD SUSCEPTIBILITY GENE IN A THEORETICAL POPULATION

Consider a theoretical population of persons over the age of 65 with a prevalence of PD of 1%, which corresponds with actual estimates of the prevalence of PD in this age group.13, 14 We examine three different theoretical mutations, with various frequencies and penetrances and assume for each mutation that it is the only genetic factor that influences risk of PD. However, similar conclusions apply to a wide range of other theoretical incompletely penetrant mutations.

Suppose, firstly, that an autosomal dominant mutation “z” present in 50% of persons is associated with a 2% risk of PD. Such a mutation would result in PD in 2% of the 50% of those who have the mutation, representing 1% of the total population. That is, this mutation accounts for all cases of PD, as the prevalence of PD in this theoretical population is 1%. It is an absolutely necessary “permissive” mutation. The risk of disease without the mutation is zero, and the increase in relative risk conferred by the mutation is infinite. Such a mutation would clearly be of enormous epidemiological significance. However, it is extremely unlikely that such a mutation would be detected by a study comparing MZ and DZ twin concordance rates. The concordance rate is defined as the number of twin pairs in which both twins have PD (+PD,+PD) divided by the sum of all twin pairs in which at least one twin has PD (the number of twin pairs that are (+PD,+PD) plus the number that are (+PD,-PD) plus the number that are (-PD,+PD)). With this definition, the concordance rates predicted to result from mutation “z” are 1.01% for MZ twins and 0.73% for DZ twins (fig 1 A; details of the calculations are available on request). The number of twins required to detect a difference between these concordance rates is exceedingly high. It would require over 14 000 affected twin pairs in each group to have 80% power to detect a difference (fig 1 D; see figure legend for method of calculating power15). This is far beyond even the most exhaustive twin study, by Tanner et al,7 in which only 71 affected MZ twin pairs and 90 affected DZ twin pairs were identified after reviewing a registry of nearly 20 000 twin pairs.

Figure 1

(A-C) Graphs of the MZ (open symbols) and DZ (closed symbols) concordance rates as a function of the penetrance of the disease associated allele. Graphs are shown for situations in which at least one copy of the disease associated allele is present in (A) 50%, (B) 5%, or (C) 1% of the population. The prevalence of the disease in this hypothetical population is 1%. Note that the range of possible penetrances is inversely proportional to the fraction of the population carrying a disease associated allele, because the product of the penetrance and the fraction of the population carrying the allele cannot exceed the prevalence of the disease. Arrows indicate the points representing concordance rates associated with the theoretical mutations “z” (A), ”x” (B), and ”a” (C) discussed in the text. (D-F) Graphs showing the number of affected twin pairs in each group (MZ and DZ) required in order to have the indicated power to detect a difference in the MZ and DZ concordance rates associated with the mutations “z”, “x”, and “a”. The sample size required to detect the difference between two proportions was calculated using the standard formula15: N=(p1(1-p1)+p2(1-p2))*(zα+zβ)2/ (p1–p2)2 Sample sizes appropriate for a one tailed (α=0.05) z test are shown.

Consider now a less prevalent but more penetrant mutation “x”, present in 5% of the population and associated with a 10% risk of PD. Such a mutation would account for PD in 10% of the 5% of those who have the mutation, or 0.5% of the population. In this case, this would represent half of the cases of PD. Furthermore, the risk of PD without “x” is 0.526%, so the increase in relative risk conferred by the mutation is 19-fold (10% v 0.526%). Like mutation “z”, mutation “x” would clearly have great epidemiological significance. However, again, it is very unlikely that such a mutation would be detected by a study of MZ and DZ twin concordance rates. If “x” were the only genetic risk for PD, the concordance rates predicted to result from “x” are 2.70% for MZ twins and 1.58% for DZ twins (fig 1 B). Again, the number of twin pairs required to detect a difference between these concordance rates is extremely large. It would require about 2100 affected twin pairs in each group to have an 80% chance of detecting a difference between these concordance rates (fig 1 E).

Finally, consider a relatively highly penetrant mutation “a”, present in 1% of the population and associated with a 55% risk of PD. Mutation “a” would account for 55% of cases of PD and confer a 121-fold increase in relative risk. Therefore, like mutations “z” or “x”, mutation “a” would be of great epidemiological significance. Furthermore, because of its higher penetrance, the twin concordance rates predicted from mutation “a” are higher than those of “z” or “x”: 17.96% for MZ twins and 8.52% for DZ twins (fig 1 C). Yet, the difference between these rates still is not reliably detectable with the number of twin pairs available. To achieve 80% power to detect this difference, a study would require about twice as many affected twin pairs compared with the numbers available in the study by Tanner et al (fig 1 F).7

Thus, over a very wide range of gene frequencies and penetrances, it is clear that even extremely large and well designed twin studies such as that by Tanner et al7 are still insufficiently powered to detect incompletely penetrant mutations. The literature contains widely varying estimates of sibling concordance rates, depending on the methodology and populations studied. Estimates range from 2% risk of PD among first degree siblings of patients with PD in a community based study,16 to MZ and DZ twin concordance rates of 16% and 11%.7 The risks of PD among siblings associated with hypothetical mutations “z”, “x”, and “a” span this entire range of estimates. Even at the relatively high concordance rates found by Tanner et al, incompletely penetrant mutations that may play a major part in risk of PD are not reliably detected (fig 1 F).

Clearly, low penetrant mutations do not act alone. Low penetrance implies that other factors, environmental by hypothesis for mutations “x”, “z”, and `”a”, must be present for clinical expression of the mutations as PD. Thus, these mutations cause enhanced susceptibility to environmental agents. Already, many genetic variants have been reported in association with PD.17–19 Although many of these associations have not been replicated, it is likely that susceptibility genes play a significant part in the risk of PD and other late onset neurodegenerative disorders. Two well documented examples of low penetrant genetic variants that seem to influence susceptibility to a late onset neurodegenerative disease are the association of the A0 tau gene allele with progressive supranuclear palsy,20–22 and the apoE4 allele with Alzheimer's disease.23 Technological advances, such as genetic microarrays, may allow rapid screening of many polymorphisms for associations with complex disorders, allowing for further expansion of our knowledge of susceptibility genes as well as clinical application of this knowledge for determining susceptibility to specific disorders.

CONCLUSIONS

Studies of rare high penetrant mutations such as the α-synuclein gene hold the prospect of disclosing a great deal about the pathophysiology of late onset idiopathic PD. However, α-synuclein mutations are absent in sporadic late onset PD, and twin studies suggest that high penetrant nuclear genetic mutations are unlikely to play a major part. None the less, it remains possible that susceptibility gene variations play a major part in the pathophysiology of a large proportion of late onset cases. Genetic mutations may induce susceptibility to environmental toxins, and both the presence of specific genetic mutations and exposure to particular environmental agents may be required for the development of late onset PD. Therefore, whereas a focus on the role of environmental factors in PD and other neurodegenerative diseases is of critical importance, this should not be done at the expense of further genetic studies, particularly with respect to low penetrant susceptibility genetic mutations. Studies addressing both genetic and environmental factors, as well as their interactions, will be necessary for a complete understanding of PD.

The example of PD serves as a pointed illustration of the complex interactions of nature (genetic factors) and nurture (environmental factors) in human diseases and abilities. Studies to address the relative contribution of each are possible, but complex and expensive. Nevertheless, this line of inquiry addresses a fundamental organising principle of brain function that goes well beyond the pathophysiology of diseases. For example, exposed to certain traumatic experiences, some people develop post-traumatic stress syndrome and can be extremely debilitated by it for the rest of their lives. Other people exposed to the similar experiences seem unfazed. Some people seem to thrive in a competitive and result oriented environment whereas others prosper more in a supportive, relaxed atmosphere. Are these interindividual differences grounded on genetic factors that condition the way the brain is changed by certain experiences and hence develops cognitive attributes and illnesses? Identifying such susceptibility genes may allow us to individualise and guide behaviour to maximise educational goals and minimise environmentally induced diseases. The data presented here illustrate that one should not be dissuaded from the potential importance of incompletely penetrant genetic mutations to a human disease or attribute simply due to the lack of significantly different concordance rates detected in studies of MZ and DZ twins.

Lessons from twin studies of parkinson's disease

REFERENCES

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Footnotes

  • DKS and MTL contributed equally to the manuscript

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