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The α-synuclein gene in multiple system atrophy

Abstract

Background: The formation of α-synuclein aggregates may be a critical event in the pathogenesis of multiple system atrophy (MSA). However, the role of this gene in the aetiology of MSA is unknown and untested.

Method: The linkage disequilibrium (LD) structure of the α-synuclein gene was established and LD patterns were used to identify a set of tagging single nucleotide polymorphisms (SNPs) that represent 95% of the haplotype diversity across the entire gene. The effect of polymorphisms on the pathological expression of MSA in pathologically confirmed cases was also evaluated.

Results and conclusion: In 253 Gilman probable or definite MSA patients, 457 possible, probable, and definite MSA cases and 1472 controls, a frequency difference for the individual tagging SNPs or tag-defined haplotypes was not detected. No effect was observed of polymorphisms on the pathological expression of MSA in pathologically confirmed cases.

  • EM, expectation-maximisation
  • EMSA-SG, European MSA Study Group
  • LD, linkage disequilibrium
  • MAF, minor allele frequency
  • MSA, multiple system atrophy
  • OPCA, olivopontocerebellar atrophy
  • PD, Parkinson’s disease
  • SND, striatonigral degeneration
  • tSNP, tagging single nucleotide polymorphism
  • alpha synuclein
  • association study
  • MSA

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