Tumour No | Tumour location | Germline mutation | Somatic mutation | ||||||
---|---|---|---|---|---|---|---|---|---|
Nucleotide | AA | Mutation type | LOH | Methylation | |||||
VHL related tumours (n=29 investigated): | |||||||||
1a | Cerebellum | 446 A/G | N78S | Missense | LOH | Negative | |||
1b | Cerebellum | 446 A/G | N78S | Missense | LOH | Negative | |||
1c | Cerebellum | 446 A/G | N78S | Missense | LOH | Negative | |||
2 | Cerebellum | 746 T/A | L178P | Missense | LOH | Negative | |||
3a | Cerebellum | 699 C/G | C162W | Missense | Negative | Negative | |||
3b | Cerebellum | 699 C/G | C162W | Missense | LOH | Negative | |||
4 | Cerebellum | 479 T/C | L89P | Missense | NI | Negative | |||
5a | Cerebellum | 761 C/A | S183X | Nonsense | NI | Negative | |||
5b | Cerebellum | 761 C/A | S183X | Nonsense | NI | Negative | |||
6 | Cerebellum | 2 kb del | Deletion | LOH | Negative | ||||
7a | Cerebellum | 2 kb del | Deletion | LOH | Negative | ||||
7b | Spine T8/9 | 2 kb del | Deletion | LOH | Negative | ||||
8a | Cerebellum | 443 ins TCT | 77insL | In frame insertion | Negative | Negative | |||
8b | Cerebellum | 443 ins TCT | 77insL | In frame insertion | Negative | Negative | |||
8c | Cerebellum | 443 ins TCT | 77insL | In frame insertion | Negative | Negative | |||
8d | Cerebellum | 443 ins TCT | 77insL | In frame insertion | Negative | Negative | |||
9 | Spine C4/5 | Not detected | Negative | Negative | |||||
10 | Cerebellum | 479 T/C | L89P | Missense | NI | Negative | |||
11 | Cerebellum | 505 T/C | Y98H | Missense | NI | Negative | |||
12 | Vermis | 665 T/C | I151T | Missense | LOH | Negative | |||
13 | Cerebellum | 505 T/C | Y98H | Missense | Negative | Negative | |||
14a | Cerebellum | Partial deletion1-150 | Deletion | NI | Negative | ||||
14b | Cerebellum | Partial deletion1-150 | Deletion | NI | Negative | ||||
15 | Cerebellum | 529 ins GCC | 106insR | In frame insertion | NI | Negative | |||
16 | Cerebellum | 2 kb del | Deletion | LOH | Negative | ||||
17a | Med. obl. | 505 T/C | Y98H | Missense | LOH | Negative | |||
17b | Spine C8 | 505 T/C | Y98H | Missense | Negative | Negative | |||
18a | Cerebellum | 475 T/A | W88R | Missense | LOH | Negative | |||
18b | Spine T7/8 | 475 T/A | W88R | Missense | LOH | Negative | |||
Tumour No | Tumour location | Germline mutation | Somatic mutation | ||||||
SSCP | LOH | Methylation | |||||||
Sporadic tumours (n=13 investigated): | |||||||||
19 | Cerebellum | Not detected | Not detected | LOH | Negative | ||||
20 | Cerebellum | Not detected | Not detected | Negative | Negative | ||||
21 | Med. obl. | Not detected | 612 del TG frameshift | Negative | Negative | ||||
22 | Cerebellum | Not detected | Not detected | Negative | Negative | ||||
23 | Med. obl. | Not detected | Not detected | LOH | Negative | ||||
24 | Cerebellum | Not detected | Not detected | Negative | Negative | ||||
25 | Cerebellum | Not detected | Not detected | LOH | Negative | ||||
26 | Med obl | Not detected | Not detected | NI | Negative | ||||
27 | Cerebellum | Not detected | Not detected | NI | Negative | ||||
28 | Spine, C1/2 | Not detected | 694 C/T R161X | Negative | Negative | ||||
29 | Cerebellum | Not detected | 681 ins 11bp frameshift | LOH | Negative | ||||
30 | Spine, T11 | Not detected | Not detected | NI | Negative | ||||
31 | Cerebellum | Not detected | Not detected | LOH | Negative |
LOH=Loss of heterozygosity; NI=Not informative for LOH analysis; Med obl=medulla oblongata.
↵1-150 Result with kind permission of Dr Stolle, Department of Medical Genetics, University of Pennsylvania. Some of the listed germline mutations were detected in collaboration with Dr Brauch and coworkers.28 Patients 4 and 10 had the same mutation 479 T/C and were related. Furthermore the patients with the mutation 505 T/C (patients 11, 13, and 17) were related. All other patients were Not related.