Table 1

Description of all likely pathogenic novel mutations identified in this study

Family numbercDNA changeAmino acid changeE/IConclusionEvidence
 7c.282_322del41p.Ala96fsE 1Likely pathogenicFrameshift
 9c.474delAp.Gly159Glufs*2E 2Likely pathogenicFrameshift
 97c.463_465delp.155_155delE2Likely pathogenicFrameshift
 3c.696insCp.Arg235Lysfs*9E 5Likely pathogenicFrameshift
 12c.831_835del5p.Val278Thrfs*11E 5Likely pathogenicFrameshift
 15c.871-2A>Gp.?I 5Likely pathogenicAffects essential splice site. In silico splicing tools predict an effect on splicing.
 16c.983T>Ap.IIe328LysE 6Likely pathogenicNovel missense mutation at highly conserved amino acid. SIFT and PolyPhen predict to be pathogenic.
 24c.1102T>Gp.Phe368ValE 8Likely pathogenicNovel missense mutation at highly conserved amino acid. SIFT and PolyPhen predict to be pathogenic.
 25c.1104C>Ap.Phe368LeuE 8Likely pathogenicNovel missense mutation at highly conserved amino acid. Different substitution at same amino acid previously reported (HGMD CM114203).
 26c.1156A>Tp.Asn386TyrE 8Likely pathogenicNovel missense mutation at highly conserved amino acid.
 28c.1115G>CArg372ThrE 8Likely pathogenicNovel missense mutation at highly conserved amino acid. Different substitution at same amino acid previously reported (HGMD CD021854, HGMD CI090392).
 29c.1130G>Cp.Gly377GluE 8Likely pathogenicNovel missense mutation at highly conserved amino acid. Different substitution at same amino acid previously reported (HGMD CM114634).
 32c.1169T>Cp.Met390ThrE 8Likely pathogenicNovel missense mutation at highly conserved amino acid.
 33c.1174–1G>Ap.?I 8Likely pathogenicAffects essential splice site. In silico splicing tools predict an effect on splicing.
 44c.1253A>Cp.Glu418AlaE 10Likely pathogenicNovel missense mutation at highly conserved amino acid.
 55c.1406delTp.Phe469Leufs*14E 11Likely pathogenicFrameshift
 56c.1408G>Tp.Asp470TyrE 11PathogenicNovel missense mutation at highly conserved amino acid. SIFT and PolyPhen predict to be pathogenic. Segregated in other family members.
 57c.1442_1443insAp.Val482Cysfs*6E 12Likely pathogenicFrameshift
 58c.1453G>Ap.Ala485ThrE 12Likely pathogenicNovel missense mutation at highly conserved amino acid.
 59c.1493+2_1493+5delTAGGp.?I 12Likely pathogenicIn silico splicing tools predict donor splice site abolished.
 61c.1493G>Tp.Arg498MetE 12Likely pathogenicNovel missense mutation at highly conserved amino acid. Different substitution at same amino acid previously reported (HGMD CM063165).
 63c.1535_1536+1delAGGp.Glu512Aspfs*7E 13Likely pathogenicFrameshift
 66c.1635_1636insAAp.Gly546Lysfs*5E 15Likely pathogenicFrameshift
 68c.1636G>Tp.Gly546XE 15Likely pathogenicFrameshift
 70c.1664delAp.Asp555Valfs*10E 15Likely pathogenicFrameshift
 84c.1729–20T>Gp.?I 16Likely pathogenicIn silico splicing tools predict cryptic splice site activated.
 88Duplication of exon 1p.?E 1PathogenicDisruption leading to severe protein alteration.
 96Deletion of exons 2–9p.?PathogenicDisruption leading to severe protein alteration.
 92Deletion of exons 1–16p.?PathogenicDisruption leading to severe protein alteration.
  • cDNA, complementary DNA; E, exon; I, intron.