Article Text
Abstract
Background: The formation of α-synuclein aggregates may be a critical event in the pathogenesis of multiple system atrophy (MSA). However, the role of this gene in the aetiology of MSA is unknown and untested.
Method: The linkage disequilibrium (LD) structure of the α-synuclein gene was established and LD patterns were used to identify a set of tagging single nucleotide polymorphisms (SNPs) that represent 95% of the haplotype diversity across the entire gene. The effect of polymorphisms on the pathological expression of MSA in pathologically confirmed cases was also evaluated.
Results and conclusion: In 253 Gilman probable or definite MSA patients, 457 possible, probable, and definite MSA cases and 1472 controls, a frequency difference for the individual tagging SNPs or tag-defined haplotypes was not detected. No effect was observed of polymorphisms on the pathological expression of MSA in pathologically confirmed cases.
- EM, expectation-maximisation
- EMSA-SG, European MSA Study Group
- LD, linkage disequilibrium
- MAF, minor allele frequency
- MSA, multiple system atrophy
- OPCA, olivopontocerebellar atrophy
- PD, Parkinson’s disease
- SND, striatonigral degeneration
- tSNP, tagging single nucleotide polymorphism
- alpha synuclein
- association study
- MSA
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Footnotes
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↵* These authors contributed equally.
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Competing interests: none declared